STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
urtBPermease component of an ABC superfamily urea transporter; Protein involved in transporter activity, binding, urea transport and transport; Belongs to the binding-protein-dependent transport system permease family. (496 aa)    
Predicted Functional Partners:
urtD
ATP-binding component of an ABC superfamily urea transporter; Protein involved in ATP binding, ATPase activity and urea transport.
 
 0.996
urtC
Permease component of an ABC superfamily urea transporter; Protein involved in transporter activity, urea transport and transport; Belongs to the binding-protein-dependent transport system permease family.
  
 0.992
urtE
ATP-binding component of an ABC superfamily urea transporter; Protein involved in ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity and urea transport.
 
 
 0.985
GBAG_1876
Substrate-binding component of an ABC superfamily urea transporter; Protein involved in amino acid transport.
 
  
 0.954
GBAG_1158
ATP-binding component of an ABC superfamily urea transporter; Protein involved in ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
 
     0.771
GBAG_1875
GntR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.
     0.726
GBAG_2523
Branched-chain amino acid transport ATP-binding protein; TC:3.A.1.4.1; overlaps another CDS with the same product name; Protein involved in ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
 
  
 0.726
LivM
Branched-chain amino acid transport system permease protein; TC:3.A.1.4.1; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
  
 0.720
GBAG_2524
Branched-chain amino acid transport system permease protein; TC:3.A.1.4.1; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
  
 0.719
GBAG_4019
Branched-chain amino acid transport ATP-binding protein; TC:3.A.1.4.1; Protein involved in ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
  
 0.714
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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