STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaKphenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (438 aa)    
Predicted Functional Partners:
paaI
Phenylacetic acid degradation thioesterase; Protein involved in thiolester hydrolase activity and phenylacetate catabolic process.
 
 
 0.994
GBAG_1942
Putative ring 1,2-phenylacetyl-CoA epoxidase subunit.
 
 
 0.993
paaD
Ring 1,2-phenylacetyl-CoA epoxidase subunit; Protein involved in phenylacetate catabolic process.
 
  
 0.992
paaC
Ring 1,2-phenylacetyl-CoA epoxidase subunit; Protein involved in oxidation-reduction process.
 
 
 0.992
GBAG_1939
phenylacetate-CoA oxygenase/reductase; Protein involved in electron carrier activity, iron-sulfur cluster binding, oxidoreductase activity, oxidation-reduction process and phenylacetate catabolic process.
 
 
 0.990
paaA
Ring 1,2-phenylacetyl-CoA epoxidase subunit; Protein involved in oxidation-reduction process.
 
 
 0.988
feaB
Phenylacetaldehyde dehydrogenase; Protein involved in oxidoreductase activity, 4-nitrophenol catabolic process, oxidation-reduction process, NAD biosynthetic process and metabolic process; Belongs to the aldehyde dehydrogenase family.
  
 0.931
paaG
oxepin-CoA-forming 1,2-epoxyphenylacetyl-CoA isomerase; Protein involved in catalytic activity, phenylacetate catabolic process and metabolic process; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.850
paaN
Aldehyde dehydrogenase; Protein involved in oxidoreductase activity, metabolic process and oxidation-reduction process.
 
 
 0.827
paaH
Protein involved in 3-hydroxyacyl-CoA dehydrogenase activity, oxidoreductase activity, 3-hydroxybutyryl-CoA dehydrogenase activity, fatty acid metabolic process, oxidation-reduction process and phenylacetate catabolic process.
  
  
 0.795
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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