STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_2022Phage shock protein D. (87 aa)    
Predicted Functional Partners:
pspB
Protein involved in phage shock and regulation of transcription, DNA-templated.
  
  
 0.956
pspC
Phage shock protein C.
  
  
 0.953
pspA
Phage shock protein A.
  
  
 0.890
GBAG_2021
Putative sucrose phosphorylase; Protein involved in catalytic activity, cation binding and carbohydrate metabolic process.
       0.450
GBAG_2020
Periplasmic substrate-binding component of an ABC superfamily sugar transporter; Protein involved in transporter activity and transport.
       0.434
GBAG_2018
Permease component of an ABC superfamily transporter; Protein involved in transporter activity and transport.
       0.412
GBAG_2019
Inner membrane permease component of an ABC superfamily transporter; Protein involved in transporter activity and transport.
       0.412
pspF
Psp operon transcriptional activator; Protein involved in ATP binding, transcription factor binding, sequence-specific DNA binding, DNA binding, nucleotide binding, nucleoside-triphosphatase activity and regulation of transcription, DNA-templated.
     
 0.409
GBAG_0317
PspA/IM30 family protein.
   
  
 0.403
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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