STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_2237Evolved beta-D-galactosidase transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated. (328 aa)    
Predicted Functional Partners:
GBAG_1021
Maltose regulon regulatory protein; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.770
GBAG_2158
Transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.767
GBAG_3056
LacI family sucrose specific transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.766
GBAG_0545
Transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.764
rafR
Putative trehalose/maltose transport regulatory protein; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.753
GBAG_2756
LacI family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
     0.726
fruR
LacI family fructose repressor; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding, regulation of transcription, DNA-templated and response to fructose.
  
     0.691
ccpA
Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding, regulation of transcription, DNA-templated, (DEPRECATED) transcription, transcription, DNA-templated and (DEPRECATED) regulation of transcription.
  
     0.685
gltB
Glutamate synthase [NADPH] large chain; Protein involved in glutamate synthase activity, oxidoreductase activity, acting on the CH-NH2 group of donors, oxidoreductase activity, glutamine metabolic process, glutamate biosynthetic process, oxidation-reduction process, metabolic process and nitrogen compound metabolic process.
    
 
 0.611
ebgA
Evolved beta-D-galactosidase, alpha subunit; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, beta-galactosidase activity, catalytic activity, carbohydrate binding and carbohydrate metabolic process.
 
   
 0.569
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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