STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcaFWcaF family colanic acid biosynthesis acetyltransferase. (183 aa)    
Predicted Functional Partners:
wcaE
WcaE family colanic acid biosynthesis glycosyltransferase.
 
  
 0.784
WcaC
WcaC family colanic acid biosynthesis glycosyltransferase; Protein involved in biosynthetic process.
 
  
 0.760
wcaA
WcaA family colanic acid biosynthesis glycosyltransferase.
 
  
 0.716
wcaB
WcaB family colanic acid biosynthesis acetyltransferase; Protein involved in transferase activity, transferring acyl groups other than amino-acyl groups.
 
  
 0.706
wcaD
WcaD family colanic acid polymerase.
  
    0.670
GBAG_2620
WcaI family colanic acid biosynthesis glycosyltransferase; Protein involved in biosynthetic process.
 
  
 0.651
wzc
Tyrosine-protein kinase; Protein involved in enzyme regulator activity, lipopolysaccharide biosynthetic process and capsule polysaccharide biosynthetic process.
 
  
 0.648
GBAG_2421
Capsular polysaccharide sugar transferase.
  
  
 0.615
GBAG_2616
WcaJ family colanic acid biosynthsis UDP-glucose lipid carrier transferase.
  
  
 0.615
wzb
Low molecular weight protein-tyrosine-phosphatase; Protein involved in protein tyrosine phosphatase activity, protein dephosphorylation and polysaccharide biosynthetic process; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.464
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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