STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_2641Protein involved in biological_process. (59 aa)    
Predicted Functional Partners:
GBAG_2640
Putative transcriptional regulator; Protein involved in DNA binding and sequence-specific DNA binding.
       0.773
mdtA
Putative RND efflux membrane fusion protein; Protein involved in transport and transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.467
mdtB
MdtB family multidrug transporter; Protein involved in transporter activity and transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
       0.467
mdtC
MdtC family multidrug transporter; Protein involved in transporter activity and transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
       0.467
mdtD
MdtD family multidrug transporter; Protein involved in response to antibiotic, transmembrane transport and transport.
       0.467
BaeS
Sensory histidine kinase; Protein involved in phosphorelay sensor kinase activity, signal transducer activity, ATP binding and signal transduction.
       0.467
BaeR
Response regulator; Protein involved in phosphorelay response regulator activity, DNA binding, phosphorelay signal transduction system and regulation of transcription, DNA-templated.
       0.467
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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