Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GBAG_2664 | GBAG_2665 | Phage tail completion protein; Protein involved in viral process. | Phage tail protein. | 0.992 |
GBAG_2664 | GBAG_2667 | Phage tail completion protein; Protein involved in viral process. | LysB family protein. | 0.867 |
GBAG_2664 | GBAG_2668 | Phage tail completion protein; Protein involved in viral process. | Phage lysin; Protein involved in lysozyme activity, peptidoglycan catabolic process and cell wall macromolecule catabolic process. | 0.838 |
GBAG_2664 | GBAG_2669 | Phage tail completion protein; Protein involved in viral process. | Hypothetical protein. | 0.917 |
GBAG_2664 | GBAG_2670 | Phage tail completion protein; Protein involved in viral process. | gpX family protein. | 0.983 |
GBAG_2664 | GBAG_2671 | Phage tail completion protein; Protein involved in viral process. | Phage head completion-stabilization protein; Protein involved in viral capsid assembly. | 0.987 |
GBAG_2664 | GBAG_2672 | Phage tail completion protein; Protein involved in viral process. | Phage terminase, endonuclease subunit; Protein involved in DNA binding, endonuclease activity and viral capsid assembly. | 0.981 |
GBAG_2664 | GBAG_2673 | Phage tail completion protein; Protein involved in viral process. | Protein involved in viral capsid assembly. | 0.983 |
GBAG_2664 | GBAG_2674 | Phage tail completion protein; Protein involved in viral process. | Protein involved in viral capsid assembly. | 0.981 |
GBAG_2664 | GBAG_2683 | Phage tail completion protein; Protein involved in viral process. | Protein involved in DNA replication. | 0.961 |
GBAG_2665 | GBAG_2664 | Phage tail protein. | Phage tail completion protein; Protein involved in viral process. | 0.992 |
GBAG_2665 | GBAG_2667 | Phage tail protein. | LysB family protein. | 0.900 |
GBAG_2665 | GBAG_2668 | Phage tail protein. | Phage lysin; Protein involved in lysozyme activity, peptidoglycan catabolic process and cell wall macromolecule catabolic process. | 0.869 |
GBAG_2665 | GBAG_2669 | Phage tail protein. | Hypothetical protein. | 0.930 |
GBAG_2665 | GBAG_2670 | Phage tail protein. | gpX family protein. | 0.983 |
GBAG_2665 | GBAG_2671 | Phage tail protein. | Phage head completion-stabilization protein; Protein involved in viral capsid assembly. | 0.987 |
GBAG_2665 | GBAG_2672 | Phage tail protein. | Phage terminase, endonuclease subunit; Protein involved in DNA binding, endonuclease activity and viral capsid assembly. | 0.981 |
GBAG_2665 | GBAG_2673 | Phage tail protein. | Protein involved in viral capsid assembly. | 0.983 |
GBAG_2665 | GBAG_2674 | Phage tail protein. | Protein involved in viral capsid assembly. | 0.981 |
GBAG_2665 | GBAG_2683 | Phage tail protein. | Protein involved in DNA replication. | 0.959 |
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