STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjBPutative inner membrane protein; FIG001826; Protein involved in biological_process. (157 aa)    
Predicted Functional Partners:
yjjP
Putative membrane protein; FIG023911.
  
 0.992
GBAG_1042
TC:2.A.61.1.1; Protein involved in C4-dicarboxylate transmembrane transporter activity and C4-dicarboxylate transport.
  
     0.701
GBAG_1967
Protein involved in biological_process; Belongs to the UPF0267 family.
  
     0.616
ycdZ
YcdZ family protein.
  
     0.607
GBAG_3569
TetR family transcriptional regulator; Protein involved in DNA binding.
       0.544
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.519
GBAG_3570
Putative glycoprotein/receptor; Protein involved in biological_process.
     
 0.436
GBAG_1477
Putative esterase; Protein involved in biological_process; Belongs to the UPF0227 family.
  
     0.434
GBAG_4120
Hyperadherence mediator; Protein involved in cation transmembrane transporter activity and potassium ion transport.
 
    0.434
frdC
Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
  
     0.419
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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