Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GBAG_3684 | GBAG_3685 | GBAG_3684 | GBAG_3685 | VgrG family protein. | Protein involved in biological_process. | 0.781 |
GBAG_3684 | GBAG_3686 | GBAG_3684 | GBAG_3686 | VgrG family protein. | Protein involved in biological_process. | 0.773 |
GBAG_3684 | GBAG_3687 | GBAG_3684 | GBAG_3687 | VgrG family protein. | FIG00639368; Protein involved in biological_process. | 0.655 |
GBAG_3684 | GBAG_3688 | GBAG_3684 | GBAG_3688 | VgrG family protein. | Protein involved in biological_process. | 0.658 |
GBAG_3684 | ptsO | GBAG_3684 | GBAG_3683 | VgrG family protein. | Nitrogen regulation-associated phosphocarrier protein; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system. | 0.402 |
GBAG_3684 | yhbJ | GBAG_3684 | GBAG_3682 | VgrG family protein. | Putative ATP-binding protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.402 |
GBAG_3685 | GBAG_3684 | GBAG_3685 | GBAG_3684 | Protein involved in biological_process. | VgrG family protein. | 0.781 |
GBAG_3685 | GBAG_3686 | GBAG_3685 | GBAG_3686 | Protein involved in biological_process. | Protein involved in biological_process. | 0.786 |
GBAG_3685 | GBAG_3687 | GBAG_3685 | GBAG_3687 | Protein involved in biological_process. | FIG00639368; Protein involved in biological_process. | 0.674 |
GBAG_3685 | GBAG_3688 | GBAG_3685 | GBAG_3688 | Protein involved in biological_process. | Protein involved in biological_process. | 0.685 |
GBAG_3685 | ptsO | GBAG_3685 | GBAG_3683 | Protein involved in biological_process. | Nitrogen regulation-associated phosphocarrier protein; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system. | 0.402 |
GBAG_3685 | yhbJ | GBAG_3685 | GBAG_3682 | Protein involved in biological_process. | Putative ATP-binding protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.402 |
GBAG_3686 | GBAG_3684 | GBAG_3686 | GBAG_3684 | Protein involved in biological_process. | VgrG family protein. | 0.773 |
GBAG_3686 | GBAG_3685 | GBAG_3686 | GBAG_3685 | Protein involved in biological_process. | Protein involved in biological_process. | 0.786 |
GBAG_3686 | GBAG_3687 | GBAG_3686 | GBAG_3687 | Protein involved in biological_process. | FIG00639368; Protein involved in biological_process. | 0.655 |
GBAG_3686 | GBAG_3688 | GBAG_3686 | GBAG_3688 | Protein involved in biological_process. | Protein involved in biological_process. | 0.674 |
GBAG_3686 | ptsO | GBAG_3686 | GBAG_3683 | Protein involved in biological_process. | Nitrogen regulation-associated phosphocarrier protein; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system. | 0.402 |
GBAG_3686 | yhbJ | GBAG_3686 | GBAG_3682 | Protein involved in biological_process. | Putative ATP-binding protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily. | 0.402 |
GBAG_3687 | GBAG_3684 | GBAG_3687 | GBAG_3684 | FIG00639368; Protein involved in biological_process. | VgrG family protein. | 0.655 |
GBAG_3687 | GBAG_3685 | GBAG_3687 | GBAG_3685 | FIG00639368; Protein involved in biological_process. | Protein involved in biological_process. | 0.674 |
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