Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GBAG_0567 | GBAG_1967 | GBAG_0567 | GBAG_1967 | YggL family protein; FIG002060; Protein involved in biological_process. | Protein involved in biological_process; Belongs to the UPF0267 family. | 0.454 |
GBAG_0567 | GBAG_3792 | GBAG_0567 | GBAG_3792 | YggL family protein; FIG002060; Protein involved in biological_process. | PAS domain-containing protein. | 0.474 |
GBAG_1967 | GBAG_0567 | GBAG_1967 | GBAG_0567 | Protein involved in biological_process; Belongs to the UPF0267 family. | YggL family protein; FIG002060; Protein involved in biological_process. | 0.454 |
GBAG_1967 | GBAG_3792 | GBAG_1967 | GBAG_3792 | Protein involved in biological_process; Belongs to the UPF0267 family. | PAS domain-containing protein. | 0.559 |
GBAG_1967 | yecM | GBAG_1967 | GBAG_2343 | Protein involved in biological_process; Belongs to the UPF0267 family. | YecM family protein. | 0.642 |
GBAG_1967 | yijD | GBAG_1967 | GBAG_4311 | Protein involved in biological_process; Belongs to the UPF0267 family. | Putative inner membrane protein. | 0.595 |
GBAG_2502 | GBAG_3792 | GBAG_2502 | GBAG_3792 | PAS domain-containing protein. | PAS domain-containing protein. | 0.637 |
GBAG_2878 | GBAG_3792 | GBAG_2878 | GBAG_3792 | FIG00361523; Protein involved in biological_process; Belongs to the UPF0304 family. | PAS domain-containing protein. | 0.642 |
GBAG_2878 | yecM | GBAG_2878 | GBAG_2343 | FIG00361523; Protein involved in biological_process; Belongs to the UPF0304 family. | YecM family protein. | 0.680 |
GBAG_2878 | yijD | GBAG_2878 | GBAG_4311 | FIG00361523; Protein involved in biological_process; Belongs to the UPF0304 family. | Putative inner membrane protein. | 0.745 |
GBAG_3792 | GBAG_0567 | GBAG_3792 | GBAG_0567 | PAS domain-containing protein. | YggL family protein; FIG002060; Protein involved in biological_process. | 0.474 |
GBAG_3792 | GBAG_1967 | GBAG_3792 | GBAG_1967 | PAS domain-containing protein. | Protein involved in biological_process; Belongs to the UPF0267 family. | 0.559 |
GBAG_3792 | GBAG_2502 | GBAG_3792 | GBAG_2502 | PAS domain-containing protein. | PAS domain-containing protein. | 0.637 |
GBAG_3792 | GBAG_2878 | GBAG_3792 | GBAG_2878 | PAS domain-containing protein. | FIG00361523; Protein involved in biological_process; Belongs to the UPF0304 family. | 0.642 |
GBAG_3792 | dsrH | GBAG_3792 | GBAG_3789 | PAS domain-containing protein. | Intracellular sulfur oxidation protein; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.798 |
GBAG_3792 | rpsL | GBAG_3792 | GBAG_3788 | PAS domain-containing protein. | SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.553 |
GBAG_3792 | tusC | GBAG_3792 | GBAG_3790 | PAS domain-containing protein. | TusC family tRNA 5-methylaminomethyl-2-thiouridine synthase; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.826 |
GBAG_3792 | tusD | GBAG_3792 | GBAG_3791 | PAS domain-containing protein. | TusD family tRNA 5-methylaminomethyl-2-thiouridine synthase; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. | 0.811 |
GBAG_3792 | yecM | GBAG_3792 | GBAG_2343 | PAS domain-containing protein. | YecM family protein. | 0.632 |
GBAG_3792 | yijD | GBAG_3792 | GBAG_4311 | PAS domain-containing protein. | Putative inner membrane protein. | 0.681 |
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