STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_3929FIG00638451; Protein involved in sequence-specific DNA binding and DNA binding. (96 aa)    
Predicted Functional Partners:
GBAG_1978
Cytotoxic translational repressor of toxin-antitoxin stability system; COG2026; Protein involved in biological_process.
  
 
 0.682
ynaF
Universal stress protein F; Protein involved in biological_process and response to stress.
       0.459
msyB
MsyB family acidic protein.
   
    0.446
GBAG_3928
Protein involved in transporter activity, xenobiotic transport, transmembrane transport and transport.
       0.415
GBAG_3195
FIG00638140; Protein involved in cellular response to DNA damage stimulus.
   
  
 0.414
GBAG_1575
FIG00637864; Protein involved in biological_process.
   
  
 0.402
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.