STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mcup_0405Transketolase subunit B. (312 aa)    
Predicted Functional Partners:
Mcup_0404
Transketolase subunit A.
 0.999
Mcup_0406
Chorismate mutase / prephenate dehydrogenase.
       0.954
Mcup_0425
Bifunctional phosphoglucose/phosphomannose isomerase.
 
  
 0.925
Mcup_2030
Ribose-5-phosphate isomerase.
    
 0.918
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
    
  0.911
Mcup_1834
Fructose-bisphosphate aldolase.
    
  0.908
Mcup_1506
Ribokinase-like domain-containing protein.
    
  0.907
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.907
Mcup_1849
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit; Belongs to the phosphohexose mutase family.
    
  0.905
Mcup_1836
Hexulose-6-phosphate isomerase.
    
  0.901
Your Current Organism:
Metallosphaera cuprina
NCBI taxonomy Id: 1006006
Other names: M. cuprina Ar-4, Metallosphaera cuprina Ar-4, Metallosphaera cuprina str. Ar-4, Metallosphaera cuprina strain Ar-4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.