STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mcup_1664Major facilitator transporter. (413 aa)    
Predicted Functional Partners:
Mcup_1627
Extracellular solute-binding protein.
  
     0.733
Mcup_0787
Amino acid permease-associated region.
 
 
 0.692
Mcup_0932
Polysaccharide biosynthesis protein.
 
    0.690
Mcup_1348
Cation diffusion facilitator family transporter.
 
  
 0.674
Mcup_1817
Major facilitator transporter.
  
     0.633
Mcup_0878
Major facilitator transporter.
  
     0.627
Mcup_1340
ABC-2 type transporter.
 
     0.605
Mcup_1755
Conserved hypothetical protein.
 
 
 0.586
Mcup_1322
Peptidase S8/S53 subtilisin kexin sedolisin.
 
     0.585
Mcup_1700
Conserved hypothetical protein.
 
     0.580
Your Current Organism:
Metallosphaera cuprina
NCBI taxonomy Id: 1006006
Other names: M. cuprina Ar-4, Metallosphaera cuprina Ar-4, Metallosphaera cuprina str. Ar-4, Metallosphaera cuprina strain Ar-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.