STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0077Hypothetical protein; Function unknown; High confidence in function and specificity. (246 aa)    
Predicted Functional Partners:
DTL3_0078
Adenosine specific kinase; High confidence in function and specificity.
       0.775
DTL3_0076
Hypothetical protein; Function unknown; High confidence in function and specificity.
  
    0.677
DTL3_0075
Hypothetical protein; Function unknown.
       0.633
DTL3_0079
PEBP family protein; High confidence in function and specificity.
       0.565
asp
Aspartate aminotransferase; AST catalyzes the reversible transfer of an alpha-amino group between aspartate and glutamate; High confidence in function and specificity.
   
    0.469
DTL3_0074
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.463
rfbB
dTDP-glucose 4,6-dehydratase; dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway.In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen; High confidence in function and specificity; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.442
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
    0.423
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.