STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0237Recombination factor protein RarA; High confidence in function and specificity. (412 aa)    
Predicted Functional Partners:
galE1
UDP-glucose-4-epimerase; High confidence in function and specificity.
       0.791
DTL3_0063
Appr-1-p processing domain-containing protein; High confidence in function and specificity.
      0.707
DTL3_1749
Predicted sugar phosphatases of the HAD superfamily; High confidence in function and specificity; Belongs to the HAD-like hydrolase superfamily.
 
      0.658
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
  
 0.633
nadE2
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
    0.601
DTL3_0235
O-methyltransferase; High confidence in function and specificity.
       0.499
DTL3_0238
Putative solute binding protein; High confidence in function and specificity.
 
     0.491
DTL3_0344
ABC transporter-like protein; High confidence in function and specificity.
 
    0.431
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
   
 0.430
cinA
Damage-inducible protein; CinA is the first gene in the competence-inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation; High confidence in function and specificity.
     
 0.430
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.