STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0449MATE efflux family protein; Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; High confidence in function and specificity. (443 aa)    
Predicted Functional Partners:
DTL3_0450
ABC transporter-like protein; High confidence in function and specificity.
  
  
 0.701
DTL3_0451
ABC-2 type transporter; High confidence in function and specificity.
  
  
 0.688
DTL3_0452
ABC-2 type transporter; High confidence in function and specificity.
  
  
 0.688
DTL3_0118
MATE efflux family protein; High confidence in function and specificity.
  
     0.677
gapA
Glyceraldehyde-3-phosphate dehydrogenase; The enzyme is responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis; High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.526
rpsA
30S ribosomal protein S1; The S1 domain occurs in a wide range of RNA associated proteins. It is structurally; High confidence in function and specificity.
  
    0.497
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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