STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rssAPutative esterase of the alpha-beta hydrolase superfamily; High confidence in function and specificity. (267 aa)    
Predicted Functional Partners:
alaS1
Alanine-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.780
DTL3_0669
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.773
pulF
Type II secretory pathway, component PulF; High confidence in function and specificity.
       0.773
DTL3_0671
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.773
DTL3_0672
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.709
DTL3_0673
Hypothetical protein; Function unknown; Family membership.
       0.709
pulG
Proposed Type II secretory pathway, pseudopilin PulG; Hypothetical protein.
       0.508
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.463
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.463
cdsA
CTP + phosphatidate <=> diphosphate + CDP-diacylglycerol; High confidence in function and specificity; Belongs to the CDS family.
       0.463
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.