STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pulFType II secretory pathway, component PulF; High confidence in function and specificity. (378 aa)    
Predicted Functional Partners:
pilT
Pilus assembly protein, ATPase associated; It is not required for pilin biogenesis, but is required for twitching motility; High confidence in function and specificity.
 
 
 0.994
pulG
Proposed Type II secretory pathway, pseudopilin PulG; Hypothetical protein.
 
  
 0.931
DTL3_0086
Hypothetical protein; Function unknown; Family membership.
   
 
 0.820
DTL3_0028
Putative membrane protein; Function unknown; Hypothetical protein.
  
  
 0.806
alaS1
Alanine-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.789
rssA
Putative esterase of the alpha-beta hydrolase superfamily; High confidence in function and specificity.
       0.773
DTL3_0669
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.773
DTL3_0671
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.773
DTL3_0672
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.722
DTL3_0673
Hypothetical protein; Function unknown; Family membership.
       0.709
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.