STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0686Type I periplasmic ligand-binding domain of uncharacterized ABC-type transport systems; High confidence in function and specificity. (313 aa)    
Predicted Functional Partners:
DTL3_0687
ABC-type uncharacterized transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
    0.998
phnK
ABC-type uncharacterized transport system, ATPase component; High confidence in function and specificity.
 
    0.958
tmk
Thymidylate kinase; High confidence in function and specificity.
       0.454
DTL3_0689
ATP-dependent exoDNAse (exonuclease V) beta subunit (RecB); Contains helicase and exonuclease domains; High confidence in function and specificity.
       0.448
cls
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.409
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.