STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0710Ribokinase-like domain-containing protein; YeiC-like sugar kinase. YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily; High confidence in function and specificity. (312 aa)    
Predicted Functional Partners:
indA
Indigoidine synthase A like protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
 
 0.999
pdxK
Pyridoxamine kinase; High confidence in function and specificity; Belongs to the pyridoxine kinase family.
 
   
 0.650
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.643
DTL3_0564
Hypothetical protein; Xylose isomerase-like TIM barrel; High confidence in function and specificity.
 
  
 0.580
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Involved in histidine biosynthesis; High confidence in function and specificity.
  
    0.534
scrK
Fructokinasae; Fructose and mannose metabolism; High confidence in function and specificity.
  
     0.512
rbsK1
Sugar kinases, ribokinase family; High confidence in function and specificity.
  
     0.485
DTL3_0898
Sugar kinases, ribokinase family; High confidence in function and specificity.
  
     0.475
RihA
Inosine-uridine nucleoside N-ribohydrolase; High confidence in function and specificity.
 
  
 0.427
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.