STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_0762D-ornithine <=> (2R,4S)-2,4-diaminopentanoate; High confidence in function and specificity. (128 aa)    
Predicted Functional Partners:
OraE
D-Lysine 5,6-aminomutase alpha subunit; High confidence in function and specificity.
 
 
  0.998
DTL3_0759
Putative conserved protein related to dihydrodipicolinate reductase; High confidence in function and specificity.
 
  
  0.992
DTL3_0777
Alanine racemase-like protein; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase-like 1; High confidence in function and specificity.
 
  
  0.971
DTL3_0760
Hypothetical protein; Function unknown; Family membership.
 
     0.935
cysK1
Cysteine synthase; High confidence in function and specificity.
 
     0.935
mutL3
DNA mismatch repair protein; A system for recognizing and repairing erroneous insertion, deletion, and mis-incorporation of bases; High confidence in function and specificity.
 
     0.795
DTL3_0116
Hypothetical protein; Function unknown; High confidence in function and specificity.
 
 
   0.774
DTL3_0758
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.411
DTL3_0757
Methyl-accepting chemotaxis sensory transducer with Cache sensor; High confidence in function and specificity.
       0.402
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.