STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_1150Hypothetical protein; Function unknown; Family membership. (72 aa)    
Predicted Functional Partners:
lysM1
Peptidoglycan-binding LysM; Lysine Motif is a small domain involved in binding peptidoglycan. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis; High confidence in function and specificity.
  
    0.653
DTL3_1152
Recombinase; This domain is usually found associated with pfam00239 in putative integrases/recombinases of mobile genetic elements of diverse bacteria and phages; High confidence in function and specificity.
  
    0.634
DTL3_1151
The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase; High confidence in function and specificity.
  
    0.617
DTL3_1153
Site-specific recombinase, DNA invertase Pin; These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; High confidence in function and specificity.
  
    0.617
DTL3_1148
Hypothetical protein; Function unknown; Family membership.
  
    0.509
DTL3_1147
Phage holins and lytic enzymes are both necessary for bacterial lysis and virus dissemination; High confidence in function and specificity.
  
    0.506
DTL3_1145
Hypothetical protein; Function unknown; High confidence in function and specificity.
  
    0.460
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.