STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_1157Mercuric transport protein periplasmic component; Bacteria provide a means of bioremediation by taking up mercuric ions (Hg2+) and reducing them to volatile, non-toxic, elemental mercury (Hg); High confidence in function and specificity. (161 aa)    
Predicted Functional Partners:
lspA3
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
     0.692
zntA
Cadmium, zinc and cobalt-transporting ATPase; P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes; High confidence in function and specificity.
 
     0.545
DTL3_1154
ArsR family transcriptional regulator; Possible repressor; High confidence in function and specificity.
 
     0.452
lysM1
Peptidoglycan-binding LysM; Lysine Motif is a small domain involved in binding peptidoglycan. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis; High confidence in function and specificity.
  
     0.444
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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