STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppF3DppF is an ATP-binding component of the dipeptide ABC transporter; High confidence in function and specificity. (267 aa)    
Predicted Functional Partners:
dppC5
ABC transporter permease; High confidence in function and specificity.
  
 0.995
dppC9
ABC-type dipeptide/oligopeptide/nickel transport system; DppC is an integral membrane component of the dipeptide ABC transporter; High confidence in function and specificity.
  
 0.965
dppB7
Peptide ABC transporter permease; High confidence in function and specificity.
   0.960
dppC11
ABC-type dipeptide/oligopeptide/nickel transport protein, permease components; DppC is an integral membrane component of the dipeptide ABC transporter; High confidence in function and specificity.
  
 0.947
DTL3_1334
Peptide ABC transporter permease; High confidence in function and specificity.
  
 0.936
DTL3_0134
Hypothetical protein; Function unknown; High confidence in function and specificity.
 
      0.899
dppC1
Nickel ABC transporter, permease subunit NikC; High confidence in function and specificity.
  
 0.867
dppC7
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; High confidence in function and specificity.
  
 0.863
dppC3
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; High confidence in function and specificity.
  
 0.854
DTL3_1274
ABC-type amino acid transport system, permease component; Probable histidine/lysine/arginine/ornithine ABC transporter permease HisM; High confidence in function and specificity.
 
 
    0.843
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.