STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_1228Uncharacterized conserved protein; High confidence in function and specificity. (177 aa)    
Predicted Functional Partners:
DTL3_1226
Hypothetical protein; Possible ECF transporter S component, folate family. All seed members were found in the vicinity of the bifunctional enzyme folC, involved in making active cofactor from imported folate; High confidence in function and specificity.
 
     0.810
prmA
This family consists of several Ribosomal protein L11 methyltransferase sequences; High confidence in function and specificity.
       0.791
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.740
DTL3_1230
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.728
DTL3_1225
Hypothetical protein; Function unknown; Family membership.
       0.601
DTL3_0294
Cell envelope-related transcriptional attenuator; High confidence in function and specificity.
  
     0.457
DTL3_1231
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.435
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.