STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_1256Basic membrane lipoprotein; This domain is found in a variety of bacterial periplasmic binding proteins; High confidence in function and specificity. (366 aa)    
Predicted Functional Partners:
xylG1
Xylose transporter ATP-binding subuni; Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization; High confidence in function and specificity.
 
 0.979
DTL3_1253
Putative ABC-type transport system, permease component; General function prediction only; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
DTL3_1254
ABC-type uncharacterized transport system, permease component; Belong to a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters, which are mainly involved in the uptake of branched-chain amino acids (AAs) or in the uptake of monosaccharides; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
DTL3_0306
ABC-type uncharacterized transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
DTL3_0314
ABC-type uncharacterized transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
DTL3_0307
Putative ABC-type transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.961
DTL3_0315
Putative ABC-type transport system, permease component; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.961
YufO3
Xylose transporter ATP-binding subunit; High confidence in function and specificity.
 
 0.953
YufO1
ABC transporter for monosaccharide transport; High confidence in function and specificity.
 
 0.934
DTL3_1257
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.549
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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