STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTL3_1596Hypothetical protein; Function unknown. (126 aa)    
Predicted Functional Partners:
DTL3_1597
Hypothetical protein; Function unknown; High confidence in function and specificity.
       0.773
DTL3_1598
Hypothetical protein; Function unknown.
       0.727
DTL3_1599
RNA polymerase sigma70; Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif; High confidence in function and specificity.
       0.676
cheD
Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.658
cheC
Chemotaxis protein CheY; The restoration of pre-stimulus levels of the chemotactic response regulator, CheY-P, is important for allowing bacteria to respond to new environmental stimuli; High confidence in function and specificity.
       0.658
pilZ
Type IV pilus assembly PilZ; Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM; High confidence in function and specificity.
       0.516
flhG
Antiactivator of flagellar biosynthesis protein flhG; High confidence in function and specificity.
       0.476
DTL3_1604
GTP-binding signal recognition particle; Flagellar GTP-binding protein; High confidence in function and specificity.
       0.476
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.