STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheDChemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa)    
Predicted Functional Partners:
DTL3_0106
Flagellar motor switch protein; High confidence in function and specificity.
 
 
 0.999
cheC
Chemotaxis protein CheY; The restoration of pre-stimulus levels of the chemotactic response regulator, CheY-P, is important for allowing bacteria to respond to new environmental stimuli; High confidence in function and specificity.
 
 0.999
tar3
Methyl-accepting chemotaxis protein; Use of the MCP allows bacteria to detect concentrations of molecules in the extracellular matrix so that the bacteria may smooth swim or tumble accordingly; Family membership.
 
  0.976
DTL3_0429
Methyl-accepting chemotaxis-like domains; Family membership.
 
  0.975
DTL3_0259
Methyl-accepting chemotaxis sensory transducer; High confidence in function and specificity.
 
  0.972
mcp
Methyl-accepting chemotaxis protein, signalling domain; An integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases; High confidence in function and specificity.
 
  0.972
DTL3_1208
Methyl-accepting chemotaxis protein; MCPs are an integral part of the transmembrane protein complex that controls bacterial chemotaxis; High confidence in function and specificity.
 
  0.972
DTL3_0823
Methyl-accepting chemotaxis sensory transducer; High confidence in function and specificity.
 
  0.968
DTL3_0757
Methyl-accepting chemotaxis sensory transducer with Cache sensor; High confidence in function and specificity.
 
  0.967
DTL3_0808
Methyl-accepting chemotaxis sensory transducer; High confidence in function and specificity.
 
  0.966
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.