STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCW_01885Chromosome segregation ATPase Smc. (564 aa)    
Predicted Functional Partners:
plpA
Fibronectin-binding protein.
  
   
 0.873
GCW_01555
HAD family hydrolase.
      
 0.693
pepC_1
Aminopeptidase.
      
 0.693
GCW_00450
mRNA degradation ribonucleases J1/J2.
      
 0.673
smc
Chromosome segregation ATPase.
      
 0.638
topJ
EAGR-box protein, DnaJ-like protein, may be involved in terminal organelle assembly.
      
 0.590
hup_2
Histone-like DNA-binding superfamily protein; Belongs to the bacterial histone-like protein family.
      
 0.583
trxB_1
thioredoxin--NADP reductase.
       0.558
GCW_01890
Part of the CF(0) (base unit) of the ATP synthase.
       0.489
arcA_1
Arginine deiminase.
       0.473
Your Current Organism:
Mycoplasma gallisepticum
NCBI taxonomy Id: 1006581
Other names: M. gallisepticum S6, Mycoplasma gallisepticum S6, Mycoplasma gallisepticum str. S6, Mycoplasma gallisepticum strain S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.