STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfoEndonuclease IV. (303 aa)    
Predicted Functional Partners:
fur
Inorganic ion uptake regulation protein, transcription factor; Belongs to the Fur family.
  
    0.817
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.
   
 
 0.795
GCW_02095
Hypothetical protein DUF3196.
       0.784
umuC
DNA polymerase IV.
  
 
 0.763
mutM
5-hydroxymethyluracil DNA glycosylase.
     
 0.761
trmE
tRNA modification GTPase TrmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
      
 0.743
hemK
Modification methylase HemK.
     
 0.709
recR
Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
     
 0.702
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
   
 
 0.680
ruvA
Holliday junction DNA helicase RuvA.
   
  
 0.663
Your Current Organism:
Mycoplasma gallisepticum
NCBI taxonomy Id: 1006581
Other names: M. gallisepticum S6, Mycoplasma gallisepticum S6, Mycoplasma gallisepticum str. S6, Mycoplasma gallisepticum strain S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.