STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCW_93171ECF-type riboflavin transporter, S component. (289 aa)    
Predicted Functional Partners:
GCW_03170
Hypothetical protein DUF3713.
       0.531
GCW_03155
Hypothetical protein.
       0.453
GCW_03160
Hypothetical protein.
       0.453
GCW_03165
Hypothetical protein DUF3713.
       0.453
GCW_03180
Hypothetical protein.
       0.449
GCW_03150
Hypothetical protein.
       0.426
GCW_03185
Sialidase.
       0.422
gatC
aspartyl/glutamyl-tRNA amidotransferase subunitC.
      
 0.410
GCW_03140
Major facilitator superfamily permease.
       0.409
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.409
Your Current Organism:
Mycoplasma gallisepticum
NCBI taxonomy Id: 1006581
Other names: M. gallisepticum S6, Mycoplasma gallisepticum S6, Mycoplasma gallisepticum str. S6, Mycoplasma gallisepticum strain S6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.