STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000307265_00317Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_000307265_00314
Unannotated protein.
 
 0.999
GCA_000307265_00315
Unannotated protein.
 
 0.999
GCA_000307265_00316
Unannotated protein.
 0.999
GCA_000307265_00318
Unannotated protein.
 
 
 0.988
GCA_000307265_00320
Unannotated protein.
 
 
 0.983
GCA_000307265_00322
Unannotated protein.
 
 
 0.974
GCA_000307265_00323
Unannotated protein.
 
 
 0.965
GCA_000307265_00515
Unannotated protein.
  
 
 0.945
GCA_000307265_00517
Unannotated protein.
  
 0.934
GCA_000307265_02160
Unannotated protein.
   
  0.836
Your Current Organism:
Oscillibacter ruminantium
NCBI taxonomy Id: 1007096
Other names: O. ruminantium GH1, Oscillibacter ruminantium GH1, Oscillibacter ruminantium KCTC 15176, Oscillibacter ruminantium NBRC 108824, Oscillibacter ruminantium str. GH1, Oscillibacter ruminantium strain GH1, Oscillibacter sp. GH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.