STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000307265_02168Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000307265_01312
Unannotated protein.
  
 
 0.911
GCA_000307265_02183
Unannotated protein.
    
  0.890
GCA_000307265_01416
Unannotated protein.
    
 0.834
GCA_000307265_01472
Unannotated protein.
  
 
  0.829
GCA_000307265_02059
Unannotated protein.
    
 0.825
GCA_000307265_00796
Unannotated protein.
     
 0.817
GCA_000307265_00836
Unannotated protein.
    
  0.800
GCA_000307265_00753
Unannotated protein.
    
  0.796
GCA_000307265_01888
Unannotated protein.
     
 0.785
GCA_000307265_02392
Unannotated protein.
     
 0.784
Your Current Organism:
Oscillibacter ruminantium
NCBI taxonomy Id: 1007096
Other names: O. ruminantium GH1, Oscillibacter ruminantium GH1, Oscillibacter ruminantium KCTC 15176, Oscillibacter ruminantium NBRC 108824, Oscillibacter ruminantium str. GH1, Oscillibacter ruminantium strain GH1, Oscillibacter sp. GH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.