STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifTNitrogen fixation protein NifT. (75 aa)    
Predicted Functional Partners:
SDX87831.1
SIR2-like domain-containing protein.
 
    0.914
SDX88026.1
Nitrogen fixation protein NifX.
 
  
 0.911
SDX87971.1
Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.899
SDX88054.1
Hypothetical protein.
 
     0.896
SDX87699.1
Nitrogen fixation protein NifB.
 
  
 0.893
SDX88260.1
Probable nitrogen fixation protein.
 
    0.887
nifW
Nitrogenase-stabilizing/protective protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.878
SDX88106.1
Leucine rich repeat variant.
 
    0.873
SDX88211.1
Nitrogen fixation protein NifX.
 
  
 0.855
SDX87947.1
Mo-nitrogenase MoFe protein subunit NifD precursor.
 
  
 0.852
Your Current Organism:
Pseudomonas kuykendallii
NCBI taxonomy Id: 1007099
Other names: LMG 26364, LMG:26364, NRRL B-59562, P. kuykendallii, Pseudomonas kuykendallii Hunter and Manter 2012, Pseudomonas sp. H2(2011), Pseudomonas sp. H6(2011), Pseudomonas sp. H7(2011), strain H2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.