STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV654_03595Unannotated protein. (97 aa)    
Predicted Functional Partners:
AV654_04765
Unannotated protein.
 
  
 0.864
AV654_33890
Unannotated protein; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
    
 0.863
AV654_07360
Unannotated protein.
   
 
 0.828
AV654_02135
Unannotated protein.
 
  
 0.826
AV654_13090
Unannotated protein.
   
 
 0.781
AV654_30960
Unannotated protein.
 
 
 0.704
AV654_26705
Unannotated protein.
   
 
 0.696
GCA_000213315_01442
Unannotated protein.
   
 
 0.678
AV654_17190
Unannotated protein.
 
  
 0.570
AV654_25115
Unannotated protein.
  
     0.564
Your Current Organism:
Paenibacillus elgii
NCBI taxonomy Id: 1007103
Other names: P. elgii B69, Paenibacillus elgii B69, Paenibacillus elgii str. B69, Paenibacillus elgii strain B69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.