STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV654_07675Unannotated protein; Belongs to the ABC transporter superfamily. (337 aa)    
Predicted Functional Partners:
AV654_07670
Unannotated protein.
 
  0.947
AV654_07665
Unannotated protein.
 
 
  0.946
AV654_12560
Unannotated protein.
 
 
  0.854
AV654_31650
Unannotated protein.
 
  0.842
AV654_15650
Unannotated protein.
 
 
  0.838
AV654_01275
Unannotated protein.
 
 
  0.838
AV654_02525
Unannotated protein.
 
 
  0.810
AV654_16410
Unannotated protein.
 
 
  0.807
AV654_07680
Unannotated protein; Belongs to the ABC transporter superfamily.
 
    
0.806
AV654_23540
Unannotated protein.
 
 
  0.775
Your Current Organism:
Paenibacillus elgii
NCBI taxonomy Id: 1007103
Other names: P. elgii B69, Paenibacillus elgii B69, Paenibacillus elgii str. B69, Paenibacillus elgii strain B69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.