STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV654_09265Unannotated protein. (78 aa)    
Predicted Functional Partners:
AV654_09270
Unannotated protein.
 
  
 0.902
AV654_22105
Unannotated protein.
  
     0.756
AV654_09260
Unannotated protein; Belongs to the FtsK/SpoIIIE/SftA family.
       0.741
rnj-2
Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
       0.719
AV654_06850
Unannotated protein.
  
     0.710
AV654_09250
Unannotated protein.
 
     0.687
AV654_22000
Unannotated protein.
  
     0.682
AV654_22040
Unannotated protein.
  
     0.681
AV654_17400
Unannotated protein.
  
     0.676
AV654_09255
Unannotated protein.
       0.675
Your Current Organism:
Paenibacillus elgii
NCBI taxonomy Id: 1007103
Other names: P. elgii B69, Paenibacillus elgii B69, Paenibacillus elgii str. B69, Paenibacillus elgii strain B69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.