STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PT7_16613-oxoacid CoA-transferase subunit A. (235 aa)    
Predicted Functional Partners:
PT7_1660
Putative coenzyme A transferase subunit.
 0.999
PT7_0202
Putative 3-oxoadipate CoA-transferase subunit B.
 
 0.996
PT7_2884
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.931
PT7_3150
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
  
 
 0.931
PT7_3228
Fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.931
PT7_2188
hydroxymethylglutaryl-CoA lyase.
  
 
 0.927
PT7_2568
hydroxymethylglutaryl-CoA lyase.
  
 
 0.927
PT7_3388
Pyruvate carboxyltransferase.
  
 
 0.927
PT7_0495
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.919
PT7_0998
Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.919
Your Current Organism:
Pusillimonas sp. T77
NCBI taxonomy Id: 1007105
Other names: P. sp. T7-7, Pusillimonas sp. T7-7
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