Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PT7_1035 | PT7_1852 | Putative outer membrane protein; Belongs to the skp family. | Hypothetical protein. | 0.710 |
PT7_1852 | PT7_1035 | Hypothetical protein. | Putative outer membrane protein; Belongs to the skp family. | 0.710 |
PT7_1852 | PT7_1853 | Hypothetical protein. | Hypothetical protein. | 0.692 |
PT7_1852 | PT7_1854 | Hypothetical protein. | Putative arylsulfatase protein. | 0.845 |
PT7_1852 | PT7_1855 | Hypothetical protein. | Putative nonspecific acid phosphatase precursor. | 0.837 |
PT7_1852 | PT7_1856 | Hypothetical protein. | Hypothetical protein. | 0.825 |
PT7_1852 | PT7_1857 | Hypothetical protein. | Hypothetical protein. | 0.791 |
PT7_1852 | PT7_1858 | Hypothetical protein. | Hypothetical protein. | 0.766 |
PT7_1852 | PT7_1859 | Hypothetical protein. | Hypothetical protein. | 0.815 |
PT7_1852 | PT7_1860 | Hypothetical protein. | Hypothetical protein. | 0.789 |
PT7_1852 | PT7_1863 | Hypothetical protein. | Hypothetical protein. | 0.788 |
PT7_1853 | PT7_1852 | Hypothetical protein. | Hypothetical protein. | 0.692 |
PT7_1853 | PT7_1854 | Hypothetical protein. | Putative arylsulfatase protein. | 0.749 |
PT7_1853 | PT7_1855 | Hypothetical protein. | Putative nonspecific acid phosphatase precursor. | 0.673 |
PT7_1853 | PT7_1856 | Hypothetical protein. | Hypothetical protein. | 0.652 |
PT7_1853 | PT7_1857 | Hypothetical protein. | Hypothetical protein. | 0.669 |
PT7_1853 | PT7_1858 | Hypothetical protein. | Hypothetical protein. | 0.661 |
PT7_1853 | PT7_1859 | Hypothetical protein. | Hypothetical protein. | 0.656 |
PT7_1853 | PT7_1860 | Hypothetical protein. | Hypothetical protein. | 0.691 |
PT7_1853 | PT7_1863 | Hypothetical protein. | Hypothetical protein. | 0.776 |
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