STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PT7_2989LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
PT7_3142
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.599
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.528
PT7_1947
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.527
PT7_2228
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.526
PT7_2252
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.504
PT7_1585
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.500
PT7_3603
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.481
PT7_3545
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.471
PT7_3469
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.456
PT7_3592
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.453
Your Current Organism:
Pusillimonas sp. T77
NCBI taxonomy Id: 1007105
Other names: P. sp. T7-7, Pusillimonas sp. T7-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.