STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PT7_3605Galactarate dehydratase. (520 aa)    
Predicted Functional Partners:
PT7_0673
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.979
PT7_3102
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.756
PT7_0391
PfkB.
 
   
 0.641
PT7_3604
L-lactate cytochrome c reductase.
       0.564
PT7_3600
Dihydrodipicolinate synthetase; Belongs to the DapA family.
    
 0.547
PT7_3565
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.492
PT7_3606
Hypothetical protein.
       0.470
PT7_0393
2-dehydro-3-deoxy-phosphogluconate aldolase.
 
  
 0.436
PT7_2171
Hypothetical protein.
 
   
 0.427
PT7_3603
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.415
Your Current Organism:
Pusillimonas sp. T77
NCBI taxonomy Id: 1007105
Other names: P. sp. T7-7, Pusillimonas sp. T7-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.