STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384935_00138Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000384935_00839
Unannotated protein.
  
 
 0.795
GCA_000384935_00993
Unannotated protein.
  
     0.734
GCA_000384935_00994
Unannotated protein.
  
     0.730
GCA_000384935_00132
Unannotated protein.
       0.701
GCA_000384935_00133
Unannotated protein.
       0.701
GCA_000384935_00134
Unannotated protein.
       0.701
GCA_000384935_00135
Unannotated protein.
       0.701
GCA_000384935_00136
Unannotated protein.
       0.701
GCA_000384935_00137
Unannotated protein.
       0.701
GCA_000384935_00991
Unannotated protein.
  
     0.686
Your Current Organism:
gamma proteobacterium SCGC AAA076P13
NCBI taxonomy Id: 1007119
Other names: g. proteobacterium SCGC AAA076-P13, gamma proteobacterium SCGC AAA076-P13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.