STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP67808.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)    
Predicted Functional Partners:
AKP66510.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.768
AKP67935.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
AKP68307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
AKP68308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
AKP67169.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
AKP67707.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
AKP67600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
AKP66238.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
AKP67330.1
Choloylglycine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.413
Your Current Organism:
Lactobacillus ginsenosidimutans
NCBI taxonomy Id: 1007676
Other names: L. ginsenosidimutans, Lactobacillus sp. EMML 3041, strain EMML 3041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.