STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP67891.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
AKP67892.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.917
AKP66901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.583
AKP67307.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AKP66844.1
Glycerol phosphate lipoteichoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
AKP66596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
AKP67379.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
AKP67091.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
AKP66169.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
AKP68296.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
Your Current Organism:
Lactobacillus ginsenosidimutans
NCBI taxonomy Id: 1007676
Other names: L. ginsenosidimutans, Lactobacillus sp. EMML 3041, strain EMML 3041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.