BN1708_002030 protein (Verticillium longisporum)

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Predicted Interactions

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BN1708_002030

RRM domain-containing protein. (781 aa)

Predicted Functional Partners:

BN1708_017461

0.600

BN1708_018048

0.600

BN1708_001477

0.600

BN1708_002140

0.568

BN1708_011641

0.568

BN1708_018579

0.568

BN1708_001057

0.568

BN1708_001449

0.493

BN1708_009397

0.490

BN1708_013314

0.490

Your Current Organism:

Verticillium longisporum

NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN1708_001057	BN1708_002030	A0A0G4MGR5	A0A0G4KHF9	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	RRM domain-containing protein.	0.568
BN1708_001057	BN1708_002140	A0A0G4MGR5	A0A0G4KH97	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.861
BN1708_001057	BN1708_009397	A0A0G4MGR5	A0A0G4KGF2	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.954
BN1708_001057	BN1708_011641	A0A0G4MGR5	A0A0G4L2P6	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Cytochrome b5 heme-binding domain-containing protein.	0.861
BN1708_001057	BN1708_013314	A0A0G4MGR5	A0A0G4LJP5	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Uncharacterized protein.	0.954
BN1708_001057	BN1708_018579	A0A0G4MGR5	A0A0G4M9E7	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.861
BN1708_001449	BN1708_002030	A0A0G4MTB9	A0A0G4KHF9	CFEM domain-containing protein.	RRM domain-containing protein.	0.493
BN1708_001477	BN1708_002030	A0A0G4MT49	A0A0G4KHF9	Uncharacterized protein.	RRM domain-containing protein.	0.600
BN1708_002030	BN1708_001057	A0A0G4KHF9	A0A0G4MGR5	RRM domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.568
BN1708_002030	BN1708_001449	A0A0G4KHF9	A0A0G4MTB9	RRM domain-containing protein.	CFEM domain-containing protein.	0.493
BN1708_002030	BN1708_001477	A0A0G4KHF9	A0A0G4MT49	RRM domain-containing protein.	Uncharacterized protein.	0.600
BN1708_002030	BN1708_002140	A0A0G4KHF9	A0A0G4KH97	RRM domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.568
BN1708_002030	BN1708_009397	A0A0G4KHF9	A0A0G4KGF2	RRM domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.490
BN1708_002030	BN1708_011641	A0A0G4KHF9	A0A0G4L2P6	RRM domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.568
BN1708_002030	BN1708_013314	A0A0G4KHF9	A0A0G4LJP5	RRM domain-containing protein.	Uncharacterized protein.	0.490
BN1708_002030	BN1708_017461	A0A0G4KHF9	A0A0G4L2I8	RRM domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.600
BN1708_002030	BN1708_018048	A0A0G4KHF9	A0A0G4LPQ7	RRM domain-containing protein.	Uncharacterized protein.	0.600
BN1708_002030	BN1708_018579	A0A0G4KHF9	A0A0G4M9E7	RRM domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.568
BN1708_002140	BN1708_001057	A0A0G4KH97	A0A0G4MGR5	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.861
BN1708_002140	BN1708_002030	A0A0G4KH97	A0A0G4KHF9	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	RRM domain-containing protein.	0.568

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

39

average node degree:

7.09

avg. local clustering coefficient:

0.856

expected number of edges:

14

PPI enrichment p-value:

2.87e-08

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0071840

Cellular component organization or biogenesis

10 of 1338

0.95

1.02

2.79e-06

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016887

ATP hydrolysis activity

10 of 218

1.74

4.19

2.53e-14

GO:0016787

Hydrolase activity

11 of 1267

1.02

1.31

1.16e-09

GO:0005524

ATP binding

10 of 1174

1.01

1.22

4.95e-08

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

11 of 4420

0.48

0.37

0.0039

GO:0043229

Intracellular organelle

11 of 5032

0.42

0.32

0.0081

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4198

Mixed, incl. Hedgehog ligand biogenesis, and Domain present in ubiquitin-regulatory proteins

10 of 54

2.35

8.35

6.26e-20

CL:4200

Hedgehog ligand biogenesis, and Derlin

7 of 28

2.48

6.43

6.63e-14

CL:4202

Mixed, incl. Sel1-like repeat, and Cellular response to topologically incorrect protein

4 of 23

2.32

2.98

1.52e-06

CL:4261

Mixed, incl. Ovarian tumor domain proteases, and PUL domain

3 of 15

2.38

2.12

9.72e-05

CL:4204

Mixed, incl. Sel1-like repeat, and Derlin

3 of 18

2.3

2.02

0.00014

(more ...)

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-5689896

Ovarian tumor domain proteases

10 of 17

2.85

11.95

1.64e-24

MAP-5358346

Hedgehog ligand biogenesis

10 of 32

2.57

10.24

1.43e-22

MAP-110320

Translesion Synthesis by POLH

10 of 33

2.56

10.19

1.43e-22

MAP-110313

Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template

10 of 53

2.35

8.73

6.20e-21

MAP-73893

DNA Damage Bypass

10 of 58

2.32

8.46

1.13e-20

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0008540

Proteasome regulatory particle, base subcomplex

2 of 3

2.9

1.44

0.0025

GOCC:0032991

Protein-containing complex

11 of 2435

0.73

0.7

6.95e-06

GOCC:0005737

Cytoplasm

9 of 2554

0.63

0.47

0.0039

GOCC:0005622

Intracellular

11 of 6178

0.33

0.25

0.0320

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003959

ATPase, AAA-type, core

10 of 66

2.26

7.62

7.71e-19

IPR003960

ATPase, AAA-type, conserved site

6 of 36

2.3

4.57

3.55e-10

IPR003593

AAA+ ATPase domain

9 of 155

1.84

4.35

4.96e-13

IPR041569

AAA ATPase, AAA+ lid domain

5 of 29

2.32

3.79

2.49e-08

IPR027417

P-loop containing nucleoside triphosphate hydrolase

10 of 686

1.24

1.86

1.33e-09

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00382

ATPases associated with a variety of cellular activities

9 of 154

1.85

4.51

9.94e-14

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