STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_017148Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
BN1708_007686
Sld5 domain-containing protein.
   
 0.997
BN1708_018079
Sld5 domain-containing protein.
   
 0.995
BN1708_015413
Sld5 domain-containing protein.
   
 0.995
BN1708_006841
Uncharacterized protein.
   
 0.994
BN1708_010571
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
   
 0.993
BN1708_015607
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
   
 0.993
BN1708_011497
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.989
BN1708_013083
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.989
BN1708_001137
DNA helicase; Belongs to the MCM family.
   
 0.986
BN1708_013142
Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.975
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.