STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_017143ATPase_AAA_core domain-containing protein. (213 aa)    
Predicted Functional Partners:
BN1708_006433
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.990
BN1708_017731
Uncharacterized protein.
  
 
  0.959
BN1708_006925
Uncharacterized protein.
  
 
 0.948
BN1708_004539
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 
0.935
BN1708_008125
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 
0.935
BN1708_003830
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.913
BN1708_003831
Uncharacterized protein.
  
 
 0.913
BN1708_011531
J domain-containing protein.
  
 
 0.909
BN1708_020763
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
 
 0.877
BN1708_002135
Uncharacterized protein.
  
 
 0.729
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
Server load: low (12%) [HD]