STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_011091Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (448 aa)    
Predicted Functional Partners:
BN1708_010387
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 0.999
BN1708_000163
Uncharacterized protein.
  
 
 0.980
BN1708_004735
Uncharacterized protein.
  
 
 0.980
BN1708_000116
Dihydrolipoyl dehydrogenase.
  
 0.959
BN1708_018157
Uncharacterized protein.
  
 0.959
BN1708_015924
Lipoyl-binding domain-containing protein.
 
 0.958
BN1708_001424
Lipoyl-binding domain-containing protein.
 
 0.958
BN1708_014753
Uncharacterized protein.
  
 0.953
BN1708_019979
Uncharacterized protein.
   
 0.952
BN1708_009271
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.944
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.