STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_011365Sulfhydryl oxidase. (252 aa)    
Predicted Functional Partners:
BN1708_005595
Uncharacterized protein.
    
 0.988
BN1708_008175
Uncharacterized protein.
    
 0.988
BN1708_005053
Uncharacterized protein.
   
 0.766
BN1708_001551
zf-Tim10_DDP domain-containing protein.
   
 0.727
BN1708_006496
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 
 0.704
BN1708_013366
Uncharacterized protein.
   
 
 0.643
BN1708_012533
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.635
BN1708_006257
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.635
BN1708_010281
Uncharacterized protein.
    
 
 0.571
BN1708_007521
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.571
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.