STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_003819Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1225 aa)    
Predicted Functional Partners:
BN1708_006352
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
   
 0.807
BN1708_017241
SWIRM domain-containing protein.
   
 0.768
BN1708_005926
SWIRM domain-containing protein.
   
 0.768
BN1708_013147
Uncharacterized protein.
   
 0.742
BN1708_006213
Uncharacterized protein.
   
 0.742
BN1708_012328
Nudix hydrolase domain-containing protein.
     
 0.648
BN1708_001244
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.621
BN1708_001247
Uncharacterized protein.
    
0.621
BN1708_001250
PhoLip_ATPase_N domain-containing protein.
    
0.621
BN1708_016532
Uncharacterized protein.
    
 0.621
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.